Curation Information

Molecular and physiological analysis of an OxyR-regulated ahpC promoter in Xanthomonas campestris pv. phaseoli.;Loprasert S, Fuangthong M, Whangsuk W, Atichartpongkul S, Mongkolsuk S;Molecular microbiology 2000 Sep; 37(6):1504-14 [10998180]
OxyR [Q8PCA2, view regulon]
Reported TF sp.
Xanthomonas campestris pv. phaseoli
Reported site sp.
Xanthomonas campestris pv. phaseoli
Created by
Dinara Sagitova
Curation notes

Experimental Process

Primer extension analysis identified the ahpC transcription start site. EMSA confirmed that OxyR binds to the ahpC promoter. DNase I footprinting localized OxyR binding site on the ahpC promoter. CAT reporter assays confirmed OxyR-dependent repression of ahpC.

Transcription Factor Binding Sites

Gene Regulation

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

Site sequence Regulated genes Gene diagram Experimental techniques TF function TF type