Transcription Factor Binding Site Information

Shewanella piezotolerans - NC_011566.1
LexA [UniProtKB:B8CUX0, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CTGTAAAGTGCAACAG + [5342832, 5342847] 26150814 Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details PSSM site search (ECO:0005659) - 1120

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... swp_5124 swp_5119 swp_5120 swp_5121 swp_5122 swp_5123 swp_5125 swp_5126 swp_5127
Gene Locus tag Description
swp_5124 swp_5124 Sigma-70 region 3:Sigma-70 region 2:Sigma-70 region 4
swp_5119 swp_5119 Flagellar hook-associated protein 2
swp_5120 swp_5120 Flagellar protein FliS
swp_5121 swp_5121 hypothetical protein
swp_5122 swp_5122 Flagellar hook-length control protein
swp_5123 swp_5123 Flagellar basal body-associated protein FliL
swp_5125 swp_5125 MotA/TolQ/ExbB proton channel
swp_5126 swp_5126 MotB protein
swp_5127 swp_5127 hypothetical protein