Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00024470
Genome
Lactococcus lactis - NC_009004.1
TF
CcpA [UniProtKB:Q9CF33, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGTAAAGGCTTAAA + [297968, 297981] 17028270 Experimental technique details Consensus search (ECO:0005624) - Experimental technique details DNA-array expression analysis (ECO:0005525) - 867

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... phnD llmg_0311 phnC phnB llmg_0315 cpdC llmg_0317 tpx
Gene Locus tag Description
phnD llmg_0312 phosphonate ABC transporter phosphonate-binding protein phnD
llmg_0311 llmg_0311 hypothetical protein
phnC llmg_0313 phosphonates import ATP-binding protein phnC
phnB llmg_0314 phosphonate transport system permease phnB
llmg_0315 llmg_0315 phosphonate ABC transporter permease
cpdC llmg_0316 2,3-cyclic-nucleotide 2'phosphodiesterase
llmg_0317 llmg_0317 hypothetical protein
tpx llmg_0318 thiol peroxidase