Transcription Factor Binding Site Information

Saccharopolyspora erythraea - NC_009142.1
GlnR [UniProtKB:A4FQD5, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGAACAATGCCGCAAA - [4478535, 4478550] 24931311 Experimental technique details Consensus search (ECO:0005624) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 832

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... narG narH narJ narI SACE_4066 SACE_4065 SACE_4071 tnp
Gene Locus tag Description
narG SACE_4070 nitrate reductase subunit alpha
narH SACE_4069 nitrate reductase subunit beta
narJ SACE_4068 nitrate reductase subunit delta
narI SACE_4067 nitrate reductase gamma chain
SACE_4066 SACE_4066 C4-dicarboxylate transporter/malic acid transport protein
SACE_4065 SACE_4065 ATP/GTP-binding protein
SACE_4071 SACE_4071 hypothetical protein
tnp SACE_4072 transposase, ISlxx5