Transcription Factor Binding Site Information

Saccharopolyspora erythraea - NC_009142.1
GlnR [UniProtKB:A4FQD5, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTTGCATCTCGGTAAC + [4155500, 4155515] 24931311 Experimental technique details Consensus search (ECO:0005624) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 832

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... narK SACE_3798 SACE_3800 nirB nirB nirD SACE_3804 SACE_3805
Gene Locus tag Description
narK SACE_3799 nitrite extrusion protein
SACE_3798 SACE_3798 SIR2 family transcriptional regulator
SACE_3800 SACE_3800 assimilatory nitrate reductase catalytic subunit
nirB SACE_3801 assimilatory nitrite reductase large subunit
nirB SACE_3802 nitrite reductase (NAD(P)H) large subunit
nirD SACE_3803 nitrite reductase (NAD(P)H) small subunit
SACE_3804 SACE_3804 bifunctional uroporphyrinogen-III synthetase/response regulator domain-containing protein
SACE_3805 SACE_3805 chalcone/stilbene synthase