Transcription Factor Binding Site Information

Saccharopolyspora erythraea - NC_009142.1
GlnR [UniProtKB:A4FQD5, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GACACGATGGCCGAAA + [1923822, 1923837] 24931311 Experimental technique details Consensus search (ECO:0005624) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 832

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... SACE_1746 gluB1 SACE_1744 gluD SACE_1747 SACE_1748 SACE_1749
Gene Locus tag Description
SACE_1746 SACE_1746 glutamate ABC transporter ATP-binding protein
gluB1 SACE_1745 glutamate binding protein
SACE_1744 SACE_1744 amino acid ABC transporter permease
gluD SACE_1743 glutamate permease
SACE_1747 SACE_1747 hypothetical protein
SACE_1748 SACE_1748 (dimethylallyl)adenosine tRNA methylthiotransferase
SACE_1749 SACE_1749 hypothetical protein