Transcription Factor Binding Site Information

Saccharopolyspora erythraea - NC_009142.1
GlnR [UniProtKB:A4FQD5, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CAAACGCCTGAAAAAA + [697443, 697458] 24931311 Experimental technique details Consensus search (ECO:0005624) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 832

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... ureA citA citA4 SACE_0631 ureB ureC ureF ureG ureD
Gene Locus tag Description
ureA SACE_0634 urease gamma subunit protein
citA SACE_0633 citrate synthase
citA4 SACE_0632 citrate (Si) synthase
SACE_0631 SACE_0631 hypothetical protein
ureB SACE_0635 urease subunit beta
ureC SACE_0636 urease subunit alpha
ureF SACE_0637 urease accessory protein
ureG SACE_0638 urease accessory protein
ureD SACE_0639 urease accessory protein