Transcription Factor Binding Site Information

Pseudomonas syringae group genomosp. 3 - NC_004578.1
PvdS [UniProtKB:Q884G0, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CAAAATATTCCTACAGGAATCTCGTTCTC - [2329190, 2329218] 18363796 Experimental technique details Luciferase reporter assay (ECO:0005648) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 765

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PSPTO_2145 PSPTO_2144 PSPTO_2143 PSPTO_2142 PSPTO_2141 PSPTO_2140 PSPTO_2139 PSPTO_2138 PSPTO_2146
Gene Locus tag Description
PSPTO_2145 PSPTO_2145 iron-regulated membrane protein
PSPTO_2144 PSPTO_2144 hypothetical protein
PSPTO_2143 PSPTO_2143 hypothetical protein
PSPTO_2142 PSPTO_2142 hypothetical protein
PSPTO_2141 PSPTO_2141 cation ABC transporter substrate-binding protein
PSPTO_2140 PSPTO_2140 cation ABC transporter ATP-binding protein
PSPTO_2139 PSPTO_2139 cation ABC transporter permease
PSPTO_2138 PSPTO_2138 ABC transporter periplasmic substrate-binding protein
PSPTO_2146 PSPTO_2146 pyoverdine biosynthesis regulatory gene