Transcription Factor Binding Site Information

Pseudomonas syringae group genomosp. 3 - NC_004578.1
PvdS [UniProtKB:Q884G0, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CTAAATTTGTCAGCCGGTTTTACGTTCTA + [2367750, 2367778] 18363796 Experimental technique details Luciferase reporter assay (ECO:0005648) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - 765

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... pvdP PSPTO_2156 PSPTO_2155 PSPTO_2154 pvdE
Gene Locus tag Description
pvdP PSPTO_5624 PvdP; similar to SP:Q9I188; identified by sequence similarity; putative
PSPTO_2156 PSPTO_2156 renal dipeptidase family protein
PSPTO_2155 PSPTO_2155 class V aminotransferase
PSPTO_2154 PSPTO_2154 hypothetical protein
pvdE PSPTO_2153 pyoverdine ABC transporter, ATP-binding/permease protein