Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00014d00
Genome
Nostoc sp. PCC 7120 - NC_003272.1
TF
NtcA [UniProtKB:P0A4U6, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GTTAGCAGCGCTAC + [2983133, 2983146] 24417914 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - 692

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... alr2482 nadD alr2484 nadE alr2486
Gene Locus tag Description
alr2482 alr2482 nicotinate phosphoribosyltransferase
nadD alr2483 nicotinic acid mononucleotide adenylyltransferase
alr2484 alr2484 hypothetical protein
nadE alr2485 NAD synthetase
alr2486 alr2486 ABC transporter ATP-binding protein