Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00012ac0
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
AmpR [UniProtKB:P24734, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GCTTTTGGAAGGTT + [4956179, 4956192] 24157832 Experimental technique details ChIP-PCR (ECO:0005620) - Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details qPCR [quantitative real-time] (ECO:0005660) - Experimental technique details RNA-Seq (ECO:0005664) - 647

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PA4421 PA4420 ftsL ftsI murE murF mraY murD ftsW murG murC ddlB ftsQ ftsA ftsZ PA4406.1 lpxC rnpB
Gene Locus tag Description
PA4421 PA4421 cell division protein MraZ
PA4420 PA4420 S-adenosyl-methyltransferase MraW
ftsL PA4419 cell division protein FtsL
ftsI PA4418 penicillin-binding protein 3
murE PA4417 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
murF PA4416 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
mraY PA4415 phospho-N-acetylmuramoyl-pentapeptide-transferase
murD PA4414 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
ftsW PA4413 cell division protein FtsW
murG PA4412 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase
murC PA4411 UDP-N-acetylmuramate--L-alanine ligase
ddlB PA4410 D-alanine--D-alanine ligase
ftsQ PA4409 cell division protein FtsQ
ftsA PA4408 cell division protein FtsA
ftsZ PA4407 cell division protein FtsZ
PA4406.1 PA4406.1 ncRNA
lpxC PA4406 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
rnpB PA4421.1 ncRNA