Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000089a0
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
LasR [UniProtKB:P25084, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CTAACAAAAGACATAG - [1087614, 1087629] 19682264 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - 422

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... mvfR phnB phnA pqsE pqsD pqsC pqsB pqsA nadA PA1005
Gene Locus tag Description
mvfR PA1003 transcriptional regulator MvfR
phnB PA1002 anthranilate synthase component II
phnA PA1001 anthranilate synthase component I
pqsE PA1000 Quinolone signal response protein
pqsD PA0999 3-oxoacyl-ACP synthase
pqsC PA0998 PqsC
pqsB PA0997 PqsB
pqsA PA0996 coenzyme A ligase
nadA PA1004 quinolinate synthetase
PA1005 PA1005 hypothetical protein