Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00008990
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
LasR [UniProtKB:P25084, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
CAATCAGAAATGTCCC + [5836796, 5836811] 19682264 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details Motif-discovery (ECO:0005558) - 422

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PA5184 PA5183 PA5182 PA5181.1 PA5181 PA5180 PA5179 PA5185 PA5186 PA5187 PA5188 PA5189 PA5190
Gene Locus tag Description
PA5184 PA5184 chorismate mutase
PA5183 PA5183 hypothetical protein
PA5182 PA5182 hypothetical protein
PA5181.1 PA5181.1 ncRNA
PA5181 PA5181 oxidoreductase
PA5180 PA5180 hypothetical protein
PA5179 PA5179 transcriptional regulator
PA5185 PA5185 hypothetical protein
PA5186 PA5186 iron-containing alcohol dehydrogenase
PA5187 PA5187 acyl-CoA dehydrogenase
PA5188 PA5188 3-hydroxyacyl-CoA dehydrogenase
PA5189 PA5189 transcriptional regulator
PA5190 PA5190 nitroreductase