Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000088a0
Genome
Pseudomonas aeruginosa - NC_002516.2
TF
LasR [UniProtKB:P25084, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
GAAAGGGATAGGCTAG + [5366213, 5366228] 19682264 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details DNA-array expression analysis (ECO:0005525) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - 421

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... cueR PA4773 PA4774 PA4775 pmrA pmrB
Gene Locus tag Description
cueR PA4778 protein CueR
PA4773 PA4773 hypothetical protein
PA4774 PA4774 hypothetical protein
PA4775 PA4775 hypothetical protein
pmrA PA4776 PmrA: two-component regulator system response regulator PmrA
pmrB PA4777 PmrB: two-component regulator system signal sensor kinase PmrB