Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00007430
Genome
Escherichia coli - NC_000913.2
TF
NarL [UniProtKB:P0AF28, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TAACCCAAAATGGGTA + [1656001, 1656016] 19251855 Experimental technique details Beta-gal reporter assay - Experimental technique details DNAse footprinting (ECO:0005631) - Experimental technique details EMSA (ECO:0001807) - 376

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... ynfH ynfG ynfF ynfE dmsD ynfA ynfB speG ynfC ynfD
Gene Locus tag Description
ynfH b1590 oxidoreductase, membrane subunit
ynfG b1589 oxidoreductase, Fe-S subunit
ynfF b1588 S- and N-oxide reductase, A subunit, periplasmic
ynfE b1587 probable selenate reductase, periplasmic
dmsD b1591 twin-argninine leader-binding protein for DmsA and TorA
ynfA b1582 inner membrane protein, UPF0060 family
ynfB b1583 predicted protein
speG b1584 spermidine N1-acetyltransferase
ynfC b1585 lipoprotein, UPF0257 family
ynfD b1586 predicted protein