Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_000064e0
Genome
Pseudomonas syringae group genomosp. 3 - NC_004578.1
TF
Fur [UniProtKB:Q87WN7, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTGCGGACCGTTCCCAT + [3242907, 3242923] 21784947 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details Motif-discovery (ECO:0005558) - 373

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PSPTO_2880 PSPTO_2879 PSPTO_2878 PSPTO_2877 PSPTO_2876 PSPTO_2875 PSPTO_2874 PSPTO_2873 PSPTO_2872 PSPTO_2871 PSPTO_2870 PSPTO_2869 PSPTO_2868 PSPTO_2867 PSPTO_5672 PSPTO_2881 PSPTO_2882
Gene Locus tag Description
PSPTO_2880 PSPTO_2880 hypothetical protein
PSPTO_2879 PSPTO_2879 lipoprotein
PSPTO_2878 PSPTO_2878 lipoprotein
PSPTO_2877 PSPTO_2877 hypothetical protein
PSPTO_2876 PSPTO_2876 ABC transporter permease
PSPTO_2875 PSPTO_2875 ABC transporter ATP-binding protein
PSPTO_2874 PSPTO_2874 ppkA-related protein
PSPTO_2873 PSPTO_2873 hypothetical protein
PSPTO_2872 PSPTO_2872 HopL1 protein
PSPTO_2871 PSPTO_2871 hypothetical protein
PSPTO_2870 PSPTO_2870 hypothetical protein
PSPTO_2869 PSPTO_2869 hypothetical protein
PSPTO_2868 PSPTO_2868 hypothetical protein
PSPTO_2867 PSPTO_2867 TspO/MBR family protein
PSPTO_5672 PSPTO_5672 ncRNA
PSPTO_2881 PSPTO_2881 hypothetical protein
PSPTO_2882 PSPTO_2882