Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00006440
Genome
Pseudomonas syringae group genomosp. 3 - NC_004578.1
TF
Fur [UniProtKB:Q87WN7, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
ATGACCATCATTATCGT - [1228747, 1228763] 21784947 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details Motif-discovery (ECO:0005558) - 373

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... PSPTO_5636 PSPTO_1114 PSPTO_1115 cfa PSPTO_1117 PSPTO_1118 PSPTO_1119 PSPTO_1120 phrB PSPTO_1122 PSPTO_1123
Gene Locus tag Description
PSPTO_5636 PSPTO_5636 hypothetical protein
PSPTO_1114 PSPTO_1114 hypothetical protein
PSPTO_1115 PSPTO_1115 membrane protein
cfa PSPTO_1116 cyclopropane-fatty-acyl-phospholipid synthase
PSPTO_1117 PSPTO_1117 hypothetical protein
PSPTO_1118 PSPTO_1118 amine oxidase, flavin-containing protein
PSPTO_1119 PSPTO_1119 short chain dehydrogenase/reductase family oxidoreductase
PSPTO_1120 PSPTO_1120 hypothetical protein
phrB PSPTO_1121 deoxyribodipyrimidine photolyase
PSPTO_1122 PSPTO_1122 MerR family transcriptional regulator
PSPTO_1123 PSPTO_1123 hypothetical protein