Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00003fa0
Genome
Caulobacter vibrioides - NC_002696.2
TF
LexA [UniProtKB:Q9A724, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TATGTTCTTGTTATGTTCG + [1483049, 1483067] 18083815 Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - Experimental technique details qRT-PCR [RNA] (ECO:0001808) - Experimental technique details Visual sequence inspection (nan) - 158

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... CC_1330 CC_1329
Gene Locus tag Description
CC_1330 CC_1330 moaA/nifB/pqqE family protein
CC_1329 CC_1329 ECF subfamily RNA polymerase sigma factor