Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00002200
Genome
Escherichia coli - NC_000913.2
TF
RutR [UniProtKB:P0ACU2, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TTTACCATCTGGTCAT + [3221532, 3221547] 18515344 Experimental technique details ChIP-chip (ECO:0006007) - Experimental technique details EMSA (ECO:0001807) - Experimental technique details Motif-discovery (ECO:0005558) - Experimental technique details PSSM site search (ECO:0005659) - 102

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... ebgA ebgR ebgC
Gene Locus tag Description
ebgA b3076 cryptic beta-D-galactosidase, alpha subunit
ebgR b3075 DNA-binding transcriptional repressor
ebgC b3077 cryptic beta-D-galactosidase, beta subunit