Transcription Factor Binding Site Information

dbxref
CollecTF:EXPSITE_00000820
Genome
Vibrio cholerae - NC_002505.1
TF
RpoN [UniProtKB:Q9KP49, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGGCATACATATTGC - [2339341, 2339355] 22723378 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details RNA-Seq (ECO:0005664) - 10

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... flgK flgL flgJ flgI
Gene Locus tag Description
flgK VC2191 flagellar hook-associated protein FlgK
flgL VC2190 flagellar hook-associated protein FlgL
flgJ VC2192 flagellar rod assembly protein/muramidase FlgJ
flgI VC2193 flagellar basal body P-ring biosynthesis protein FlgA