Transcription Factor Binding Site Information

Vibrio cholerae - NC_002505.1
RpoN [UniProtKB:Q9KP49, view regulon]

Supporting Evidence

Binding site Location Publication Experimental techniques used Curation
TGGCGCGAATCTTGC + [1246283, 1246297] 22723378 Experimental technique details ChIP-Seq (ECO:0006009) - Experimental technique details RNA-Seq (ECO:0005664) - 10

Regulated genes

Regulated genes for each binding site are displayed below. Gene regulation diagrams show binding sites, positively-regulated genes, negatively-regulated genes, both positively and negatively regulated genes, genes with unspecified type of regulation. For each indvidual site, experimental techniques used to determine the site are also given.

... ... VC1171 trpD VC1170 trpA VC1173 VC1174 VC1175 VC1176
Gene Locus tag Description
VC1171 VC1171 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase
trpD VC1172 anthranilate phosphoribosyltransferase
VC1170 VC1170 tryptophan synthase subunit beta
trpA VC1169 tryptophan synthase subunit alpha
VC1173 VC1173 anthranilate synthase component II
VC1174 VC1174 anthranilate synthase component I
VC1175 VC1175 hypothetical protein
VC1176 VC1176 hypothetical protein