LexA
UniProtKB: P0A7C2 regulon and binding site collection of Escherichia coli str. K-12 substr. MG1655
For the selected transcription factor and species, the list of curated binding sites in the database are displayed below. Gene regulation diagrams show [binding sites], [positively-regulated genes], [negatively-regulated genes], [both positively and negatively regulated genes], [genes with unspecified type of regulation].
| Genome | TF | TF conformation | Site Sequence | Site Location | Experimental Techniques | Gene Regulation | Curation | PMID |
|---|---|---|---|---|---|---|---|---|
| NC_000913.2 | P0A7C2 | DIMER | TACTGTATATAAAACCAGTT | + [2749748, 2749767] | GST pull-down assay (ECO:0005640), qPCR [quantitative real-time] (ECO:0005660) | nadK (b2615), recN (b2616) | 68 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TGCTGTATATACTCACAGCA | + [4255090, 4255109] | GST pull-down assay (ECO:0005640), qPCR [quantitative real-time] (ECO:0005660) | dgkA (b4042), lexA (b4043), dinF (b4044) | 68 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTATATAAAAACAGTA | + [1229950, 1229969] | GST pull-down assay (ECO:0005640), qPCR [quantitative real-time] (ECO:0005660) | hlyE (b1182), umuD (b1183), umuC (b1184), dsbB (b1185) | 68 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | GACTGTATAAAACCACAGCC | + [65833, 65852] | GST pull-down assay (ECO:0005640), qPCR [quantitative real-time] (ECO:0005660) | polB (b0060), araD (b0061) | 68 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | CGCTGGATATCTATCCAGCA | + [1944049, 1944068] | GST pull-down assay (ECO:0005640), qPCR [quantitative real-time] (ECO:0005660) | ruvA (b1861), ruvB (b1860), yobI (b4677) | 68 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTACATCCATACAGTA | + [1020164, 1020183] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | sulA (b0958), sxy (b0959), yccS (b0960), yccF (b0961) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTTTATTTATACAGTA | + [3851321, 3851340] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | istR (b4616), tisB (b4618) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTATATAAAAACAGTA | + [1229950, 1229969] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | hlyE (b1182), umuD (b1183), umuC (b1184), dsbB (b1185) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | AACTGTATATAAATACAGTT | + [3815719, 3815738] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | yicC (b3644), dinD (b3645) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTATATAAAACCAGTT | + [2749748, 2749767] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | nadK (b2615), recN (b2616) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTATAAAATCACAGTT | + [1928788, 1928807] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | yebG (b1848), purT (b1849) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TGCTGTATATACTCACAGCA | + [4255090, 4255109] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | dgkA (b4042), lexA (b4043), dinF (b4044) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | ACCTGTATAAATAACCAGTA | + [1120729, 1120748] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | dinI (b1061), pyrC (b1062) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTACGTATCGACAGTT | + [1808200, 1808219] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | yniC (b1727), ydjM (b1728) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGATGATATATACAGGT | + [4577938, 4577957] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | symR (b4625), symE (b4347), hsdS (b4348), hsdM (b4349) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTATGCTCATACAGTA | + [2821850, 2821869] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | recA (b2699), ygaD (b2700) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | ACCTGAATGAATATACAGTA | + [4271977, 4271996] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | uvrA (b4058), yjbR (b4057), yjbQ (b4056), ssb (b4059) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | AACTGGACGTTTGTACAGCA | + [4015292, 4015311] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | udp (b3831), rmuC (b3832) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | AACTGTTTTTTTATCCAGTA | + [812654, 812673] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | bioD (b0778), bioC (b0777), bioF (b0776), bioB (b0775), uvrB (b0779) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | AACTGGATAAAATTACAGGG | + [2194468, 2194487] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | metG (b2114), yehH (b4499), yehI (b2118) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTATGATTATCCAGTT | + [3646002, 3646021] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | dinQ (b4613), arsR (b3501) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | CACTGTATACTTTACCAGTG | + [250863, 250882] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | lafU (b0230), lfhA (b0229), dinB (b0231) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TCCTGTTAATCCATACAGCA | + [932350, 932369] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | lrp (b0889), ftsK (b0890) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | CACTGGATAGATAACCAGCA | + [1821505, 1821524] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | nadE (b1740), cho (b1741), ves (b1742) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | GACTGTATAAAACCACAGCC | + [65833, 65852] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | polB (b0060), araD (b0061) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | CGCTGGATATCTATCCAGCA | + [1944049, 1944068] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | ruvA (b1861), ruvB (b1860), yobI (b4677) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TATTGGCTGTTTATACAGTA | + [832258, 832277] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | ybiA (b0798), dinG (b0799), ybiB (b0800) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | ATCTGTATATATACCCAGCT | + [3995929, 3995948] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | yigB (b3812), xerC (b3811), yigA (b3810), dapF (b3809), yifL (b4558), uvrD (b3813) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGGATATTTAAACAGGT | + [1225560, 1225579] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | minC (b1176), minD (b1175), minE (b1174), ycgJ (b1177) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGGATAACACACCATGA | + [1892003, 1892022] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | yoaB (b1809), yoaC (b1810) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | GCATGTTGAAATAGCCAGTA | + [3958234, 3958253] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | yifN (b3777), ppiC (b3775), rep (b3778), gpp (b3779) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | AAATGTTTTTACATCCACTA | + [243356, 243375] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | fadE (b0221), ivy (b0220), lpcA (b0222) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | AACTCTATATTACCCCAGTT | + [1585353, 1585372] | PSSM site search (ECO:0005659), Motif-discovery (ECO:0005558), ChIP-chip (ECO:0006007) | ydeQ (b1502), ydeP (b1501), ydeR (b1503), ydeS (b1504), ydeT (b1505) | 69 | 16264194 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTATGATTATCCAGTT | + [3646002, 3646021] | PSSM site search (ECO:0005659), Northern blot (ECO:0005653) | dinQ (b4613), arsR (b3501) | 286 | 10760155 |
| NC_000913.2 | P0A7C2 | DIMER | CACTGTATAAATAAACAGCT | + [606862, 606881] | PSSM site search (ECO:0005659), Northern blot (ECO:0005653) | ybdK (b0581), sokE (b4700), hokE (b4415) | 286 | 10760155 |
| NC_000913.2 | P0A7C2 | DIMER | AACTGATTAAAAACCCAGCG | + [711237, 711256] | PSSM site search (ECO:0005659), Northern blot (ECO:0005653) | ybfE (b0685), ybfF (b0686) | 286 | 10760155 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTTTATTTATACAGTA | + [3851321, 3851340] | PSSM site search (ECO:0005659), Northern blot (ECO:0005653) | istR (b4616), tisB (b4618) | 286 | 10760155 |
| NC_000913.2 | P0A7C2 | DIMER | AGCTGTATTTGTCTCCAGTA | + [3719632, 3719651] | PSSM site search (ECO:0005659), Northern blot (ECO:0005653) | insK (b3558), insJ (b3557), sokA (b4614) | 286 | 10760155 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGATGATATATACAGGT | + [4577938, 4577957] | PSSM site search (ECO:0005659), Northern blot (ECO:0005653) | symR (b4625), symE (b4347), hsdS (b4348), hsdM (b4349) | 286 | 10760155 |
| NC_000913.2 | P0A7C2 | DIMER | CACTGGATAGATAACCAGCA | + [1821505, 1821524] | PSSM site search (ECO:0005659), Northern blot (ECO:0005653) | nadE (b1740), cho (b1741), ves (b1742) | 286 | 10760155 |
| NC_000913.2 | P0A7C2 | DIMER | AACTGGATAAAATTACAGGG | + [2194468, 2194487] | PSSM site search (ECO:0005659), Northern blot (ECO:0005653) | metG (b2114), yehH (b4499), yehI (b2118) | 286 | 10760155 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTATATAAAAACAGTA | + [1229950, 1229969] | PSSM site search (ECO:0005659), Northern blot (ECO:0005653) | hlyE (b1182), umuD (b1183), umuC (b1184), dsbB (b1185) | 286 | 10760155 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTATGCTCATACAGTA | + [2821850, 2821869] | PSSM site search (ECO:0005659), Northern blot (ECO:0005653) | recA (b2699), ygaD (b2700) | 286 | 10760155 |
| NC_000913.2 | P0A7C2 | DIMER | CACTGTATAAAAATCCTATA | + [1808182, 1808201] | EMSA (ECO:0001807), PSSM site search (ECO:0005659), Northern blot (ECO:0005653), Hydroxyl-radical footprinting (ECO:0005643) | yniC (b1727), ydjM (b1728) | 287 | 10760155 |
| NC_000913.2 | P0A7C2 | DIMER | TACTGTACGTATCGACAGTT | + [1808200, 1808219] | EMSA (ECO:0001807), PSSM site search (ECO:0005659), Northern blot (ECO:0005653), Hydroxyl-radical footprinting (ECO:0005643) | yniC (b1727), ydjM (b1728) | 287 | 10760155 |
| NC_000913.2 | P0A7C2 | DIMER | AACTGGACGTTTGTACAGCA | + [4015292, 4015311] | EMSA (ECO:0001807), PSSM site search (ECO:0005659) | udp (b3831), rmuC (b3832) | 288 | 10760155 |
| NC_000913.2 | P0A7C2 | DIMER | GACTGTATAAAACCACAGCC | + [65833, 65852] | EMSA (ECO:0001807), PSSM site search (ECO:0005659) | polB (b0060), araD (b0061) | 288 | 10760155 |
| NC_007682.3 | P0A7C2 | DIMER | GACTGTTTTTTTGTACAGTC | + [8356, 8375] | EMSA (ECO:0001807), PSSM site search (ECO:0005659), qRT-PCR [RNA] (ECO:0001808) | intI1 (pMUR050_006), ant3'9 (pMUR050_007), linF (pMUR050_008) | 665 | 21529368 |
| NC_000913.2 | P0A7C2 | DIMER | CTGAATAAATATACAG | + [246518, 246533] | EMSA (ECO:0001807), qRT-PCR [RNA] (ECO:0001808) | dinJ (b0226), yafQ (b0225), yafL (b0227) | 1034 | 19210620 |